Installation¶
NeuTomPy toolbox supports Linux, Windows and Mac OS 64-bit operating systems.
First of all, install a Conda python environment with Python 3.6 and then activate it:
conda create -n ntp_env python=3.6
conda activate ntp_env
Install some dependencies:
conda install -c simpleitk simpleitk
conda install scikit-image
conda install ipython numexpr astropy tifffile mkl_fft tqdm
conda install -c astra-toolbox astra-toolbox
pip install opencv-python read-roi
pip install -U numpy
Finally, install NeuTomPy toolbox via pip
:
pip install neutompy
NB: If a segmentation fault occurs when importing NeuTomPy, install PyQt5 via pip
:
pip install PyQt5